BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B08LP1|AL428673
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1635 1712 0.0
>3x_Contig1635
Length = 12349
Score = 1712 bits (863), Expect = 0.0
Identities = 871/873 (99%), Gaps = 1/873 (0%)
Strand = Plus / Plus
Query: 1 gatcatgagagtttacagaaagttcttaccttgaaacttttttactgtcaccctttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7529 gatcatgagagtttacagaaagttcttaccttgaaacttttttactgtcaccctttttat 7588
Query: 61 cacttcgagtaaagctttaaatgacataatttacaatataaatatggatcatctcacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7589 cacttcgagtaaagctttaaatgacataatttacaatataaatatggatcatctcacctg 7648
Query: 121 tcatcatggtcttttaggaattgtgaaggtatactaaccaattgttactctatgatctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7649 tcatcatggtcttttaggaattgtgaaggtatactaaccaattgttactctatgatctat 7708
Query: 181 ccgaaaatccgcaaactgcattagagaaaagtacaatcgaattgcaatgaccaaaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7709 ccgaaaatccgcaaactgcattagagaaaagtacaatcgaattgcaatgaccaaaacaga 7768
Query: 241 tgaacctaaaaagccgaatttcttaattattgtcgccgatgatttagggtttacagatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7769 tgaacctaaaaagccgaatttcttaattattgtcgccgatgatttagggtttacagatgt 7828
Query: 301 gtcgagttttggaggtgaaatacaaacgccaaaccttgataaattgtctaaaggtggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7829 gtcgagttttggaggtgaaatacaaacgccaaaccttgataaattgtctaaaggtggttt 7888
Query: 361 cagattcactggttttcatactgcatcggcatgttcgccaactagatcgatgttgttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7889 cagattcactggttttcatactgcatcggcatgttcgccaactagatcgatgttgttgag 7948
Query: 421 cggtactgacaaccatttggcaggtttgggccaaatggctgaatatgccaggcaatttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7949 cggtactgacaaccatttggcaggtttgggccaaatggctgaatatgccaggcaatttcc 8008
Query: 481 agaaaagttcaaggataaacctggttatgaaggttatttgaactataaggttgctgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8009 agaaaagttcaaggataaacctggttatgaaggttatttgaactataaggttgctgcatt 8068
Query: 541 gcctgamatattatccccagaatattacacgctgatttcggggaaatggcaccttggatt 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8069 gcctgaaatattatccccagaatattacacgctgatttcggggaaatggcaccttggatt 8128
Query: 601 agaaaagccatattggccaagtgaccgtggattccaaaaacgttttaccttgctgcctgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8129 agaaaagccatattggccaagtgaccgtggattccaaaaacgttttaccttgctgcctgg 8188
Query: 661 tgcaggaaaccatttcaaatgcaatttggatagcaagtttcttctcccatggatttatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8189 tgcaggaaaccatttcaaatgcaatttggatagcaagtttcttctcccatggatttatca 8248
Query: 721 ggaaaatggcgaaagggtagaccataacaagtttccagaaaacttttattccaccactta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8249 ggaaaatggcgaaagggtagaccataacaagtttccagaaaacttttattccaccactta 8308
Query: 781 cttcacagataaatttttggaatatttgaaggatgatgaagaaagaaaaggtcgcccatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8309 cttcacagataaatttttggaatatttgaaggatgatgaagaaagaaaaggtcgcccatt 8368
Query: 841 cttttggccagttgacctacacagctccacatt 873
| |||||||||||||||||||||||||||||||
Sbjct: 8369 c-tttggccagttgacctacacagctccacatt 8400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6977
Number of Sequences: 1807
Number of extensions: 6977
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)